Jesse R. Lasky, Bénédicte Bachelot, Robert Muscarella, Naomi Schwartz, Jimena Forero-Montaña, Christopher J. Nytch, Nathan G. Swenson, Jill Thompson, Jess K. Zimmerman, and María Uriarte. 2015. Ontogenetic shifts in trait-mediated mechanisms of plant community assembly. Ecology 96:2157–2169. http://dx.doi.org/10.1890/14-1809.1
Supplement
JAGS and Stan code used in demographic models.
Ecological Archives E096-190-S1.
Authors
File list (downloads)
Description
Jesse R. Lasky,1,2,3 Bénédicte Bachelot,2 Robert Muscarella,2 Naomi Schwartz,2 Jimena Forero-Montaña,4 Christopher J. Nytch,4 Nathan G. Swenson,5 Jill Thompson,6,7 Jess K. Zimmerman,7 and María Uriarte2
1Earth Institute
Columbia University
New York, New York 10025
USA
2Department of Ecology, Evolution and Environmental Biology
Columbia University
New York, New York 10027
USA
4Department of Biology
University of Puerto Rico, Rio Piedras Campus
San Juan, Puerto Rico 00931
USA
5Department of Plant Biology
Michigan State University
East Lansing, MI 48824
USA
6Centre for Ecology & Hydrology
Bush Estate
Penicuik, Midlothian EH26 0QB
United Kingdom
7Department of Environmental Sciences
University of Puerto Rico, Río Piedras Campus
San Juan, Puerto Rico 00936
USA
3 Corresponding author. E-mail: [email protected]
File list
Stan_survival_model.txt (MD5: 77ea91b7aa1d1294c63ab5a3e1a8b12c)
JAGS_survival_model.txt (MD5: 0a07b28a34f8deec8c02e208f79498d9)
JAGS_growth_model.txt (MD5: a924025e5b4fc49629d5a118367f6da7)
Description
Stan_survival_model.txt contains code for a Stan model of seedling survival.
JAGS_survival_model.txt contains code for a JAGS model of survival for trees at least 1 cm DBH.
JAGS_growth_model.txt contains code for a JAGS model of growth for trees at least 1 cm DBH
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