Ecological Archives E092-066-metadata

Ryan F. Hechinger, Kevin D. Lafferty, John P. McLaughlin, Brian L. Fredensborg, Todd C. Huspeni, Julio Lorda, Parwant K. Sandhu, Jenny C. Shaw, Mark E. Torchin, Kathleen L. Whitney, and Armand M. Kuris. 2011. Food webs including parasites, biomass, body sizes, and life stages for three California/Baja California estuaries. Ecology 92:791.

TABLE 3B. Definitions of variables in Links data sets.

Column Number Column Name Variable Variable Description
1 PresentAtCSM 0 Link is NOT present in Carpinteria Salt Marsh system
1 PresentAtCSM 1 Link IS present in Carpinteria Salt Marsh system
2 PresentAtEPB 0 Link is NOT present in Estero Punta Banda system
2 PresentAtEPB 1 Link IS present in Estero Punta Banda system
3 PresentAtBSQ 0 Link is NOT present in Bahia San Quint�n system
3 PresentAtBSQ 1 Link IS present in Bahia San Quint�n system
4 PresentAtAnyEstuary 0 Link is NOT present in ANY of the three estuarine systems
4 PresentAtAnyEstuary 1 Link IS present in at least one of the three estuarine systems
5 ConsumerNodeID nominal numeric The unordered nominal node specific ID number of the consumer in the interaction.
6 ResourceNodeID nominal numeric The unordered nominal node specific ID number of the resource in the interaction.
7 ConsumerSpeciesID nominal numeric The unordered nominal species specific ID number of the consumer in the interaction.
8 ResourceSpeciesID nominal numeric The unordered nominal species specific ID number of the resource in the interaction.
9 ConsumerSpeciesID.StageID nominal numeric The combined Species ID number and Stage ID number of the consumer, separated by the decimal point.
10 ResourceSpeciesID.StageID nominal numeric The combined Species ID number and Stage ID number of the resource, separated by the decimal point.
11 LinkTypeID 1 Predation
11 LinkTypeID 2 Social Predation
11 LinkTypeID 3 Micropredation
11 LinkTypeID 4 Parasitic Castration
11 LinkTypeID 5 Pathogen Infection
11 LinkTypeID 6 Macroparasitism
11 LinkTypeID 7 Pollination
11 LinkTypeID 8 Parasitoid Infection
11 LinkTypeID 9 Commensalism
11 LinkTypeID 10 Trophically Transmitted Parasitic Castration
11 LinkTypeID 11 Trophically Transmitted Pathogen Infection
11 LinkTypeID 12 Trophically Transmitted Parasitism
11 LinkTypeID 13 Trophically Transmitted Commensalism
11 LinkTypeID 14 Concurrent Predation on Symbionts
11 LinkTypeID 15 Trophic Transmission
11 LinkTypeID 16 Predation on free-living non-feeding stages
11 LinkTypeID 17 Predation on commensal non-feeding stages
11 LinkTypeID 18 Detritivory
11 LinkTypeID 19 Parasite Intraguild Antagonism
11 LinkTypeID 20 Durable Mutualism
11 LinkTypeID 21 Facultative Micropredation
12 LinkType nominal See metadata Table 3C for the enumerated descriptive list of link-type variables.
13 LinkEvidence Observed The link between nodes was directly observed in the field, through gut content analysis, or through parasitological examination
13 LinkEvidence Inferred The link was inferred to exist because it was observed at other localities, observed under experimental conditions, or was based on expert opinion. Inferred links also apply to parasite-host links when predators that are suitable final hosts for trophically transmitted parasites prey upon appropriate intermediate hosts in the system.
13 LinkEvidence Modeled The link was included when similar species interactions were used as models for this particular interaction.
13 LinkEvidence Speculated The link is inferred by general knowledge of the taxon, but could be inaccurate. "Speculated" in these webs is only employed for 10 links concerning uncertain feeding biology of some unidentified polychaete larvae: assuming they prey on phytoplankton, versus being non-feeding.
14 LinkEvidenceNotes nominal A qualitative description of the link evidence source.
15 LinkFrequency interval numeric For observed links, the proportion of times that the link was observed (For instance, the proportion of consumer guts within which the resource species was present).
16 LinkN integer The number of consumers that were examined to detect this particular link.
17 DietFraction interval numeric The fraction of the consumer's diet (For instance, in terms of biomass/year) comprised by the resource node.
18 ConsumptionRate interval numeric The rate at which the interaction occurs, explicitly expressed in numbers, biomass or energy per unit time.
19 VectorFrom nominal numeric The Node ID of the vector necessary for a parasitic feeding link to occur. For instance, enter the Node ID for mosquito here if the link is malaria-human. If more than one vector can lead to this type of parasitism, there will be multiple rows repeated here, one for each prey type. Note, in many cases, this will lead to duplicate links, which may need to be considered in analyses.
20 PreyFrom nominal numeric The Node ID of prey needed to be consumed for a particular parasite-prey interaction to occur (via trophic transmission). If more than one prey can lead to parasitism, there will be multiple rows repeated here, one for each prey type. Note, in many cases, this will lead to duplicate links, which may need to be considered in analyses.

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