Jesse R. Lasky, Bénédicte Bachelot, Robert Muscarella, Naomi Schwartz, Jimena Forero-Montaña, Christopher J. Nytch, Nathan G. Swenson, Jill Thompson, Jess K. Zimmerman, and María Uriarte. 2015. Ontogenetic shifts in trait-mediated mechanisms of plant community assembly. Ecology 96:2157–2169. http://dx.doi.org/10.1890/14-1809.1


Supplement

JAGS and Stan code used in demographic models.
Ecological Archives E096-190-S1.

Copyright


Authors
File list (downloads)
Description


Author(s)

Jesse R. Lasky,1,2,3 Bénédicte Bachelot,2 Robert Muscarella,2 Naomi Schwartz,2 Jimena Forero-Montaña,4 Christopher J. Nytch,4 Nathan G. Swenson,5 Jill Thompson,6,7 Jess K. Zimmerman,7 and María Uriarte2

1Earth Institute
Columbia University
New York, New York 10025
USA

2Department of Ecology, Evolution and Environmental Biology
Columbia University
New York, New York 10027
USA

4Department of Biology
University of Puerto Rico, Rio Piedras Campus
San Juan, Puerto Rico 00931
USA

5Department of Plant Biology
Michigan State University
East Lansing, MI 48824
USA

6Centre for Ecology & Hydrology
Bush Estate
Penicuik, Midlothian EH26 0QB
United Kingdom

7Department of Environmental Sciences
University of Puerto Rico, Río Piedras Campus
San Juan, Puerto Rico 00936
USA

3 Corresponding author. E-mail: jl3985@columbia.edu


File list

Stan_survival_model.txt (MD5: 77ea91b7aa1d1294c63ab5a3e1a8b12c)

JAGS_survival_model.txt (MD5: 0a07b28a34f8deec8c02e208f79498d9)

JAGS_growth_model.txt (MD5: a924025e5b4fc49629d5a118367f6da7)

Description

Stan_survival_model.txt contains code for a Stan model of seedling survival.

JAGS_survival_model.txt contains code for a JAGS model of survival for trees at least 1 cm DBH.

JAGS_growth_model.txt contains code for a JAGS model of growth for trees at least 1 cm DBH