Appendix F. Publications used for analyses of constitutive and induced defenses.
Agerbirk, N., M. Orgaard, and J. K. Nielsen. 2003. Glucosinolates, flea beetle resistance, and leaf pubescence as taxonomic characters in the genus Barbarea (Brassicaceae). Phytochemistry 63:69–80.
Alves, M. N., A. Sartoratto, and J. R. Trigo. 2007. Scopolamine in Brugmansia suaveolens (Solanaceae): defense, allocation, costs, and induced response. Journal of Chemical Ecology 33:297–309.
Baldwin, I. T. 1996. Methyl jasmonate-induced nicotine production in Nicotiana attenuata: inducing defenses in the field without wounding. Entomologia Experimentalis et Applicata 80:213–220.
Bednarek, P., L. Kerhoas, J. Einhorn, R. Franski, P. Wojtaszek, M. Rybus–Zajac, and M. Stobiecki. 2003. Profiling of flavonoid conjugates in Lupinus albus and Lupinus angustifolius responding to biotic and abiotic stimuli. Journal of Chemical Ecology 29:1127–1142.
Bennett, R. N., F. A. Mellon, E. A. S. Rosa, L. Perkins, and P. A. Kroon. 2004. Profiling glucosinolates, flavonoids, and other secondary metabolites in tissues of Azima tetracantha L. (Salvadoraceae). Journal of Agricultural and Food Chemistry 52:5856–5862.
Bialczyk, J., Z. Lechowski, and A. Libik. 1998. Modification of tannin concentration by abiotic factors in Lycopersicon esculentum Mill. seedlings. Zeitschrift fur Pflanzenkrankheiten und Pflanzenschutz 105:264–273.
Biller, A., M. Boppre, L. Witte, and T. Hartmann. 1994. Pyrrolizidine alkaloids in Chromolaena odorata – chemical and chemoecological aspects. Phytochemistry 35:615–619.
Booker, F. L. 2000. Influence of carbon dioxide enrichment, ozone and nitrogen fertilization on cotton (Gossypium hirsutum L.) leaf and root composition. Plant, Cell and Environment 23:573–583.
Borowicz, V. A., U. Albrecht, and R. T. Mayer. 2003. Effects of nutrient supply on citrus resistance to root herbivory by Diaprepes abbreviatus L. (Coleoptera: Curculionidae). Environment Entomology 32:1242–1250.
Bravo, H. R., S. V. Copaja, and J. S. Martin. 2004. Contents of 1,4-benzoxazin–3–ones and 2– benzoxazolinone from Stenandrium dulce (Nees). Zeitschrift fur Naturforschung 59:177–180.
Brown, P. D., J. G. Tokuhisa, M. Reichelt, and J. Gershenzon. 2003. Variation of glucosinolate accumulation among different organs and developmental stages of Arabidopsis thaliana. Phytochemistry 62:471–481.
Carballeira, A. 1980. Phenolic inhibitors in Erica australis L. and in associated soil. Journal of Chemical Ecology 6:593–596.
Charron, C. S., and C. E. Sams. 2004. Glucosinolate content and myrosinase activity in rapid- cycling Brassica oleracea grown in a controlled environment. Journal of the American Society for Horticultural Science 129:321–330.
Cronin, G., and D. M. Lodge. 2003. Effects of light and nutrient availability on the growth, allocation, carbon/nitrogen balance, phenolic chemistry, and resistance to herbivory of two freshwater macrophytes. Oecologia 137:32–41.
Dahler, J.M., C. A. McConchie, and C. G. N. Turnbull. 1995. Quantification of cyanogenic glycosides in seedlings of three Macadamia (Proteaceae) species. Australian Journal of Botany 43:619–628.
Davey, M. P., D. N. Bryant, I. Cummins, T. W. Ashenden, P. Gates, R. Baxter, and R. Edwards. 2004. Effects of elevated CO2 on the vasculature and phenolic secondary metabolism of Plantago maritima. Phytochemistry 65:2197–2204.
Diawara, M. M., J. T. Trumble, C. F. Quiros, and R. Hansen. 1995. Implications of distribution of linear furanocoumarins within celery. Journal of Agricultural and Food Chemistry 43:723–727.
Evans, W. C., and P. G. Treagust. 1973. Distribution of alkaloids in Anthoceris littorea and Anthoceris viscosa. Phytochemistry 12:2505–2507.
Franks, T. K., Y. Hayasaka, S. Choimes, and R. van Heeswijck. 2005. Cyanogenic glucosides in grapevine: polymorphism, identification and developmental patterns. Phytochemistry 66:165–173.
Friedman, M., and C. E. Levin. 1995. Alpha-tomatine content in tomato and tomato products determined by HPLC with pulsed amperometric detection. Journal of Agricultural and Food Chemistry 43:1507–1511.
Frölich, C., T. Hartmann, and D. Ober. 2006. Tissue distribution and biosynthesis of 1,2- saturated pyrrolizidine alkaloids in Phalaenopsis hybrids (Orchidaceae). Phytochemistry 67:1493–1502.
Gentry, C. E., R. A. Chapman, L. Henson, and R. C. Buckner. 1969. Factors affecting the alkaloid content of tall fescue (Festuca arundinacea Schreb.). Agronomy Journal 61:313–316.
Green, T. R., and C. A. Ryan. Wound-induced proteinase inhibitor in plant leaves: possible defense mechanism against insects. Science 175:776–777.
Gregianini, T. S., D. D. Porto, N. C. D. Nascimento, J. P. Fett, A. T. Henriques, and A. G. Fett- Neto. 2004. Environmental and ontogenetic control of accumulation of brachycerine, a bioactive indole alkaloid from Psychotria brachyceras. Journal of Chemical Ecology 30:2023–2036.
Hol, W. H. G., K. Vrieling, and J. A. van Veen. 2003. Nutrients decrease pyrrolizidine alkaloid concentrations in Senecio jacobaea. New Phytologist 158:175–181.
Hol, W. H. G., M. Macel, J. A. van Veen, and E. van der Meijden. 2004. Root damage and aboveground herbivory change concentration and composition of pyrrolizidine alkaloids of Senecio jacobaea. Basic and Applied Ecology 5:253–260.
Huang, C. H., X. Y. Wang, R. J. Wang, K. Xue, F. M. Yan, and C. R. Xu. 2006. Distribution and variations of three 1,4-benzoxazin&-3-ones in maize induced by the asian corn borer, Ostrinia furnacalis. Zeitschrift fur Naturforschung 61:257–262.
Hyder, P. W., E. L. Fredrickson, R. E. Estell, M. Tellez, and R. P. Gibbens. 2002. Distribution and concentration of total phenolics, condensed tannins, and nordihydroguaiaretic acid (NDGA) in creosote bush (Larrea tridentata). Biochemical Systematics and Ecology 30:905–912.
Iranbakhsh, A., M. A. Oshaghi, and A. Majd. 2006. Distribution of atropine and scopolamine in different organs and stages of development in Datura stramonium L. (Solanaceae) – structure and ultrastructure of biosynthesizing cells. Acta Biologica Cracoviensia Series Botanica 48:13–18.
Jacobs, J. J. M. R., A. Engelberts, A. F. Croes, and G. J. Wullems. 1994. Thiophene synthesis and distribution in young developing plants of Tagetes patula and Tagetes erecta. Journal of Experimental Botany 45:1459–1466.
Jürges, K., and G. Röbbelen. 1980. Practicability of a selection for glucosinolate content in swedes (Brassica napus L. var. napobrassica [L.] Rchb). Zeitschrift fur Pflanzenkrankheiten und Pflanzenschutz 85:265–274.
Kainulainen, P., J. K. Holopainen, and J. Oksanen. 1995. Effects of SO2 on the concentrations of carbohydrates and secondary compounds in Scots pine (Pinus sylvestris L.) and Norway spruce (Picea abies (L.) Karst.) seedlings. New Phytologist 130:231–238.
Keski-Saari, S., and R. Julkunen-Tiitto. 2003. Resource allocation in different parts of juvenile mountain birch plants: effect of nitrogen supply on seedling phenolics and growth. Physiologia Plantarum 118:114–126.
Khan, M. B., and J. B. Harborne. 1991. A comparison of the effect of mechanical and insect damage on alkaloid levels in Atropa acuminata. Biochemical Systematics and Ecology 19:529–534.
Kini, K. R., N. S. Vasanthi, and H. S. Shetty. 2000. Induction of β-1,3-glucanase in seedlings of pearl millet in response to infection by Sclerospora graminicola. European Journal of Plant Pathology 106:267–274.
Köllner, T. G., C. Schnee, J. Gershenzon, and J. Degenhardt. 2004. The sesquiterpene hydrocarbons of maize (Zea mays) from five groups with distinct developmental and organ-specific distributions. Phytochemistry 65:1895–1902.
Lampitt, L. H., J. H. Bushill, H. S. Rooke, and E. M. Jackson. 1943. Solanine: glycoside of the potato. II. Its distribution in the potato plant. Journal of the Society of Chemical Industry (London) 62:48–51.
Loivamäki, M., J. K. Holopainen, and A. M. Nerg. 2004. Chemical changes induced by methyl jasmonate in oilseed rape grown in the laboratory and in the field. Journal of Agricultural and Food Chemistry 52:7607–7613.
Louda, S. M., and J. E. Rodman. 1983. Ecological patterns in the glucosinolate content of a native mustard, Cardamine cordifolia, in the rocky mountains. Journal of Chemical Ecology 9:397–422.
Ludwig-Müller, J., P. Thermann, K. Pieper, and W. Hilgenberg. 1994. Peroxidase and chitinase isoenzyme activities during root infection of Chinese cabbage with Plasmodiophora brassicae. Physiologia Plantarum 90:661–670.
Matros, A., S. Amme, B. Kettig, G. H. Buck-Sorlin, U. Sonnewald, and H. P. Mock. 2006. Growth at elevated CO2 concentrations leads to modified profiles of secondary metabolites in tobacco cv. SamsunNN and to increased resistance against infection with potato virus Y. Plant, Cell and Environment 29:126–137.
Mattson, W. J., R. Julkunen-Tiitto, and D. A. Herms. 2005. CO2 enrichment and carbon partitioning to phenolics: do plant responses accord better with the protein competition or the growth differentiation balance models? Oikos 111:337–347.
Maurya, S., U. P. Singh, D. P. Singh, K. P. Singh, and J. S. Srivastava. 2005. Secondary metabolites of chickpea (Cicer arietinum) and their role in pathogenesis after infection by Sclerotium rolfsii. Zeitschrift fur Pflanzenkrankheiten und Pflanzenschutz 112:118–123.
Mercier, J., and J. Kuć. 1997. Elicitation of 6-methoxymellein in carrot leaves by Cercospora carotae. Journal of the Science of Food and Agriculture 73:60–62.
Milesi, S., B. Massot, E. Gontier, F. Bourgaud, and A. Guckert. 2001. Ruta graveolens L.: a promising species for the production of furanocoumarins. Plant Science 161:189–199.
Mooney, H. A., and C. Chu. 1974. Seasonal carbon allocation in Heteromeles arbutifolia, a California evergreen shrub. Oecologia 14:295–306.
Nelson, C. J., J. N. Seiber, and L. P. Brower. 1981. Seasonal and intraplant variation of cardenolide content in the California milkweed, Asclepias eriocarpa, and implications for plant defense. Journal of Chemical Ecology 7:981–1010.
Nikus, J., and L. M. V. Jonsson. 1999. Tissue localization of β-glucosidase in rye, maize and wheat seedlings. Physiologia Plantarum 107:373–378.
Opitz, S., and B. Schneider. 2002. Organ-specific analysis of phenylphenalenone-related compounds in Xiphidium caeruleum. Phytochemistry 61:819–825.
Radwan, M. A., G. L. Crouch, C. A. Harrington, and W. D. Ellis. 1982. Terpenes of ponderosa pine and feeding preferences by pocket gophers. Journal of Chemical Ecology 8:241–253.
Ravn, H., M. F. Pedersen, J. Borum, C. Andary, U. Anthoni, C. Christophen, and P. H. Nielsen. 1994. Seasonal variation and distribution of 2 phenolic compounds, rosmarinic acid and caffeic acid, in leaves and roots-rhizomes of eelgrass (Zostera marina L.). Ophelia 40:51–61.
Rees, S. B., and J. B. Harborne. 1985. The role of sesquiterpene lactones and phenolics in the chemical defense of the chicory plant. Phytochemistry 24:2225–2231.
Schmelz, E. A., R. J. Grebenok, D. W. Galbraith, and W. S. Bowers. 1998. Damage-induced accumulation of phytoecdysteroids in spinach: a rapid root response involving the octadecanoic acid pathway. Journal of Chemical Ecology 24:339–360.
Schmelz, E. A., R. J. Grebenok, D. W. Galbraith, and W. S. Bowers. 1999. Insect-induced synthesis of phytoecdysteroids in spinach, Spinacia oleracea. Journal of Chemical Ecology 25:1739–1757.
Sharada, M. S., S. A. Shetty, and H. S. Shetty. 1995. Infection processes of Sclerospora graminicola on Pennisetum glaucum lines resistant and susceptible to downy mildew. Mycological Research 99:317–322.
Sheen, S. J. 1969. The distribution of polyphenols, chlorogenic acid oxidase and peroxidase in different plant parts of tobacco, Nicotiana tabacum L. Phytochemistry 8:1839–1847.
Shukla, A. K., A. K. Shasany, M. M. Gupta, and S. P. S. Khanuja. 2006. Transcriptome analysis in Catharanthus roseum leaves and roots for comparative terpenoid indole alkaloid profiles. Journal of Experimental Botany 57:3921–3932.
Siciliano, T., M. De Leo, A. Bader, N. De Tommasi, K. Vrieling, A. Braca, and I. Morelli. 2005. Pyrrolizidine alkaloids from Anchusa strigosa and their antifeedant activity. Phytochemistry 66:1593–1600.
Siritunga, D., D. Arias-Garzon, W. White, and R. T. Sayre. 2004. Over-expression of hydroxynitrile lyase in transgenic cassava roots accelerates cyanogenesis and food detoxification. Plant Biotechnology Journal 2:37–43.
Soler, R., T. M. Bezemer, W. H. van der Putten, L. E. M. Vet, and J. A. Harvey. 2005. Root herbivore effects on above-ground herbivore, parasitoid and hyperparasitoid performance via changes in plant quality. Journal of Animal Ecology 74:1121–1130.
Stipanovic, R. D., L. S. Puckhaber, and A. A. Bell. 2006. Ratios of (+)- and (-)-gossypol in leaves, stems, and roots of selected accessions of Gossypium hirsutum var. marie galante (Watt) Hutchinson. Journal of Agricultural and Food Chemistry 54:1633–1637.
van Dam, N. M., and K. Vrieling. 1994. Genetic variation in constitutive and inducible pyrrolizidine alkaloid levels in Cynoglossum officinale L. Oecologia 99:374–378.
van Dam, N. M., L. Witjes, and A. Svatos. 2004. Interactions between aboveground and belowground induction of glucosinolates in two wild Brassica species. New Phytologist 161:801–810.
van Dam, N. M., C. E. Raaijmakers, and W. H. van der Putten. 2005. Root herbivory reduces growth and survival of the shoot feeding specialist Pieris rapae on Brassica nigra. Entomologia Experimentalis et Applicata 115:161–170.
van Dam, N. M., and C. E. Raaijmakers. 2006. Local and systemic induced responses to cabbage root fly larvae (Delia radicum) in Brassica nigra and B. oleracea. Chemoecology 16:17–24.
Walls, R., H. Appel, M. Cipollini, and J. Schultz. 2005. Fertility, root reserves and the cost of inducible defenses in the perennial plant Solanum carolinense. Journal of Chemical Ecology 31:2263–2288.
Wink, M. 1985. Chemical defense of lupins – biological function of quinolizidine alkaloids. Plant Systematics and Evolution 150:65–81.
Zárate, R., C. Dirks, R. van der Heijden, and R. Verpoorte.2001. Terpenoid indole alkaloid profile changes in Catharanthus pusillus during development. Plant Science 160:971–977.
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