Appendix D. List of variables and their definitions for invertebrate metrics.
| TABLE D1. Invertebrate metrics. | ||
Category |
Variable |
Definition |
Richness |
||
RICH |
Total richness (number of non-ambiguous taxa) |
|
EPTR |
Richness composed of mayflies, stoneflies, and caddisflies |
|
EPT_CHR |
Ratio of EPT richness (EPTR) to midge richness (CHR) |
|
EPEMR |
Richness composed of mayflies |
|
PLECOR |
Richness composed of stoneflies |
|
PTERYR |
Richness composed of Pteronarcys |
|
TRICHR |
Richness composed of caddisflies |
|
ODONOR |
Richness composed of odonates |
|
COLEOPR |
Richness composed of Coleoptera |
|
DIPR |
Richness composed of Diptera |
|
CHR |
Richness composed of midges |
|
ORTHOR |
Richness composed of Orthocladinae midges |
|
ORTHO_CHR |
Ratio of orthoclad richness (ORTHOR) to midge richness (CHR) |
|
TANYR |
Richness composed of Tanytarsanii midges |
|
TANY_CHR |
Ratio of Tanytarsanii richness (TANYR) to midge richness (CHR) |
|
NCHDIPR |
Richness composed of non-midge Diptera |
|
NONINSR |
Richness composed of non-insects |
|
ODIPNIR |
Richness composed of non-midge Diptera and non-insects |
|
MOLCRUR |
Richness composed of molluscs and crustaceans |
|
GASTROR |
Richness composed of Gastropoda |
|
BIVALR |
Richness composed of Bivalvia |
|
CORBICR |
Richness composed of Corbicula |
|
AMPHIR |
Richness composed of Amphipoda |
|
ISOPR |
Richness composed of Isopoda |
|
OLIGOR |
Richness composed of Oligochaeta |
|
% Richness |
||
EPTRp |
Perecntage of total richness composed of mayflies, stoneflies, and caddisflies |
|
EPT_CHRp |
Ratio of EPT perecntage richness (EPTRp) to midge perecntage richness (CHRp) |
|
EPEMRp |
Perecntage of total richness composed of mayflies |
|
PLECORp |
Perecntage of total richness composed of stoneflies |
|
PTERYRp |
Perecntage of total richness composed of Pteronarcys |
|
TRICHRp |
Perecntage of total richness composed of caddisflies |
|
ODONORp |
Perecntage of total richness composed of odonates |
|
COLEOPRp |
Perecntage of total richness composed of Coleoptera |
|
DIPRp |
Perecntage of total richness composed of Diptera |
|
CHRp |
Perecntage of total richness composed of midges |
|
ORTHORp |
Perecntage of total richness composed of Orthocladinae midges |
|
ORTHO_CHRp |
Ratio of orthoclad percentage richness (ORTHORp) to midge percentage richness (CHRp) |
|
TANYRp |
Perecntage of total richness composed of Tanytarsanii midges |
|
TANY_CHRp |
Ratio of Tanytarsanii percentage richness (TANYRp) to midge percentage richness (CHRp) |
|
NCHDIPRp |
Perecntage of total richness composed of non-midge Diptera |
|
NONINSRp |
Perecntage of total richness composed of non-insects |
|
ODIPNIRp |
Perecntage of total richness composed of non-midge Diptera and non-insects |
|
MOLCRURp |
Perecntage of total richness composed of molluscs and crustaceans |
|
GASTRORp |
Perecntage of total richness composed of Gastropoda |
|
BIVALRp |
Perecntage of total richness composed of Bivalvia |
|
CORBICRp |
Perecntage of total richness composed of Corbicula |
|
AMPHIRp |
Perecntage of total richness composed of Amphipoda |
|
ISOPRp |
Perecntage of total richness composed of Isopoda |
|
OLIGORp |
Perecntage of total richness composed of Oligochaeta |
|
Abundance (density, number/m2) |
||
ABUND |
Total number (abundance) of non-ambiguous taxa in the sample |
|
EPT |
Abundance composed of mayflies, stoneflies, and caddisflies |
|
EPT_CH |
Ratio of EPT Abundance (EPT) to midge abundance (CH) |
|
EPEM |
Abundance composed of mayflies |
|
PLECO |
Abundance composed of stoneflies |
|
PTERY |
Abundance composed of Pteronarcys |
|
TRICH |
Abundance composed of caddisflies |
|
ODONO |
Abundance composed of odonates |
|
COLEOP |
Abundance composed of Coleoptera |
|
DIP |
Abundance composed of Diptera |
|
CH |
Abundance composed of midges |
|
ORTHO |
Abundance composed of Orthocladinae midges |
|
ORTHO_CH |
Ratio of orthoclad abundance (ORTHO) to midge abundance (CH) |
|
TANY |
Abundance composed of Tanytarsanii midges |
|
TANY_CH |
Ratio of Tanytarsanii abundance (TANY) to midge abundance (CH) |
|
NCHDIP |
Abundance composed of non-midge Diptera |
|
NONINS |
Abundance composed of non-insects |
|
ODIPNI |
Abundance composed of non-midge Diptera and non-insects |
|
MOLCRU |
Abundance composed of molluscs and crustaceans |
|
GASTRO |
Abundance composed of Gastropoda |
|
BIVAL |
Abundance composed of Bivalvia |
|
CORBIC |
Abundance composed of Corbicula |
|
AMPHI |
Abundance composed of Amphipoda |
|
ISOP |
Abundance composed of Isopoda |
|
OLIGO |
Abundance composed of Oligochaeta |
|
% Abundance (density, number/m2) |
||
EPTp |
Percentage of total abundance composed of mayflies, stoneflies, and caddisflies |
|
EPT_CHp |
Ratio of EPT percentage of total abundance (EPTp) to midge percentage of total abundance (CHp) |
|
EPEMp |
Percentage of total abundance composed of mayflies |
|
PLECOp |
Percentage of total abundance composed of stoneflies |
|
PTERYp |
Percentage of total abundance composed of Pteronarcys |
|
TRICHp |
Percentage of total abundance composed of caddisflies |
|
ODONOp |
Percentage of total abundance composed of odonates |
|
COLEOPp |
Percentage of total abundance composed of Coleoptera |
|
DIPp |
Percentage of total abundance composed of Diptera |
|
CHp |
Percentage of total abundance composed of midges |
|
ORTHOp |
Percentage of total abundance composed of Orthocladinae midges |
|
ORTHO_CHp |
Ratio of orthoclad percentage of total abundance (ORTHOp) to midge percentage of total abundance (CHp) |
|
TANYp |
Percentage of total abundance composed of Tanytarsanii midges |
|
TANY_CHp |
Ratio of Tanytarsanii percentage of total abundance (TANYp) to midge percentage of total abundance (CHp) |
|
NCHDIPp |
Percentage of total abundance composed of non-midge Diptera |
|
NONINSp |
Percentage of total abundance composed of non-insects |
|
ODIPNIp |
Percentage of total abundance composed of non-midge Diptera and non-insects |
|
MOLCRUp |
Percentage of total abundance composed of molluscs and crustaceans |
|
GASTROp |
Percentage of total abundance composed of Gastropoda |
|
BIVALp |
Percentage of total abundance composed of Bivalvia |
|
CORBICp |
Percentage of total abundance composed of Corbicula |
|
AMPHIp |
Percentage of total abundance composed of Amphipoda |
|
ISOPp |
Percentage of total abundance composed of Isopoda |
|
OLIGOp |
Percentage of total abundance composed of Oligochaeta |
|
Dominance |
||
Dom1 |
Percentage of total abundance represented by the most abundant taxon |
|
Dom1R |
Number of. taxa in dominance class |
|
Dom2 |
Percentage of total abundance represented by the two most abundant taxon |
|
Dom2R |
Number of taxa in dominance class |
|
Dom3 |
Percentage of total abundance represented by the three most abundant taxon |
|
Dom3R |
Number of. taxa in dominance class |
|
Dom4 |
Percentage of total abundance represented by the four most abundant taxon |
|
Dom4R |
Number of taxa in dominance class |
|
Dom5 |
Percentage of total abundance represented by the five most abundant taxon |
|
Dom5R |
Number of taxa in dominance class |
|
Dominant taxa and % abundance (density, number/m2) |
||
Dom1 |
Percentage of total abundance represented by the most abundant taxon |
|
TX1 |
Taxon name |
|
Dom2 |
Percentage of total abundance represented by the 2nd most abundant taxon |
|
TX2 |
Taxon name |
|
Dom3 |
Percentage of total abundance represented by the 3rd most abundant taxon |
|
TX3 |
Taxon name |
|
Dom4 |
Percentage of total abundance represented by the 4th most abundant taxon |
|
TX4 |
Taxon name |
|
Dom5 |
Percentage of total abundance represented by the 5th most abundant taxon |
|
TX5 |
Taxon name |
|
Functional groups |
||
Richness |
||
PA_rich |
Richness composed of parasites |
|
PR_rich |
Richness composed of predators |
|
OM_rich |
Richness composed of omnivores |
|
GC_rich |
Richness composed of collector-gatherers |
|
FC_rich |
Richness composed of filtering-collectors |
|
SC_rich |
Richness composed of scrapers |
|
SH_rich |
Richness composed of shredders |
|
PI_rich |
Richness composed of piercers |
|
% Richness |
||
pPA_rich |
Percentage of total richness composed of parasites |
|
pPR_rich |
Percentage of total richness composed of predators |
|
pOM_rich |
Percentage of total richness composed of omnivores |
|
pGC_rich |
Percentage of total richness composed of collector-gatherers |
|
pFC_rich |
Percentage of total richness composed of filtering-collectors |
|
pSC_rich |
Percentage of total richness composed of scrapers |
|
pSH_rich |
Percentage of total richness composed of shredders |
|
pPI_rich |
Percentage of total richness composed of piercers |
|
FG_rich_class |
Percentage of richness that could be assigned a tolerance value |
|
Abundance (density, number/m2) |
||
PA_abund |
Total abundance composed of parasites |
|
PR_abund |
Total abundance composed of predators |
|
OM_abund |
Total abundance composed of omnivores |
|
GC_abund |
Total abundance composed of collector-gatherers |
|
FC_abund |
Total abundance composed of filtering-collectors |
|
SC_abund |
Total abundance composed of scrapers |
|
SH_abund |
Total abundance composed of shredders |
|
PI_abund |
Total abundance composed of piercers |
|
% Abundance |
||
pPA_abund |
Percentage of total abundance composed of parasites |
|
pPR_abund |
Percentage of total abundance composed of predators |
|
pOM_abund |
Percentage of total abundance composed of omnivores |
|
pGC_abund |
Percentage of total abundance composed of collector-gatherers |
|
pFC_abund |
Percentage of total abundance composed of filtering-collectors |
|
pSC_abund |
Percentage of total abundance composed of scrapers |
|
pSH_abund |
Percentage of total abundance composed of shredders |
|
pPI_abund |
Percentage of total abundance composed of piercers |
|
FG_abund_class |
Percentage of abundance that could be assigned to a functional group |
|
Tolerance |
||
Richness |
||
RichTOL |
Average EPA tolerance values for sample based on richness |
|
Intol_rich |
Number of taxa in the intolerant class |
|
Modtol_rich |
Number of taxa in the moderately tolerant class |
|
Tol_rich |
Number of taxa in the tolerant class |
|
% Richness |
||
Intol_richp |
Percentage of taxa richness in the intolerant class |
|
Modtol_richp |
Percentage of taxa richness in the moderately tolerant class |
|
Tol_richp |
Percentage of taxa richness in the tolerant class |
|
RICH_TOL_CLASS |
Percentage of richness that could be assigned a tolerance value |
|
Abundance (no./m2) |
||
AbundTOL |
Abundance-weighted EPA tolerance value for sample |
|
Intol_abund |
Total abundance in the intolerant class |
|
Modtol_abund |
Total abundance in the moderately tolerant class |
|
Tol_abund |
Total abundance in the tolerant class |
|
% Abundance (density no./m2) |
||
Intol_abundp |
Percentage of abundance in the intolerant class |
|
ModTol_abundp |
Percentage of abundance in the moderately tolerant class |
|
Tol_abundp |
Percentage of abundance in the tolerant class |
|
ABUND_TOL_CLASS |
Percentage of abundance that could be assigned a tolerance value |
|
Behavior classes |
||
Richness |
||
cn_rich |
Number of clinger taxa |
|
cb_rich |
Number of climber taxa |
|
sp_rich |
Number of sprawler taxa |
|
bu_rich |
Number of burrower taxa |
|
sw_rich |
Number of swimmer taxa |
|
dv_rich |
Number of diver taxa |
|
sk_rich |
Number of skater taxa |
|
% Richness |
||
cn_richp |
Percentage of richness composed of clinger taxa |
|
cb_richp |
Percentage of richness composed of climber taxa |
|
sp_richp |
Percentage of richness composed of sprawler taxa |
|
bu_richp |
Percentage of richness composed of burrower taxa |
|
sw_richp |
Percentage of richness composed of swimmer taxa |
|
dv_richp |
Percentage of richness composed of diver taxa |
|
sk_richp |
Percentage of richness composed of skater taxa |
|
BEHAV_RICH_CLASS |
Percentage of total taxa richness that was assigned a behavioral trait |
|
Abundance (no./m2) |
||
cn_abund |
Abundance of clinger taxa |
|
cb_abund |
Abundance of climber taxa |
|
sp_abund |
Abundance of sprawler taxa |
|
bu_abund |
Abundance of burrower taxa |
|
sw_abund |
Abundance of swimmer taxa |
|
dv_abund |
Abundance of diver taxa |
|
sk_abund |
||
% Abundance (density no./m2) |
||
cn_abundp |
Percentage of abundance composed of clinger taxa |
|
cb_abundp |
Percentage of abundance composed of climber taxa |
|
sp_abundp |
Percentage of abundance composed of sprawler taxa |
|
bu_abundp |
Percentage of abundance composed of burrower taxa |
|
sw_abundp |
Percentage of abundance composed of swimmer taxa |
|
dv_abundp |
Percentage of abundance composed of diver taxa |
|
sk_abundp |
Percentage of abundance composed of skater taxa |
|
BEHAV_Abund_Class |
Percentage of total abundance that was assigned a behavioral trait |
|
Ordination scores (non-metric multidimensional scaling, NMDS) |
||
NMDS1 |
Axis-1 site score, 4th root transformation, Bray-Curtis similarity for RTH, Jaccard similarity for QMH samples |
|
NMDS2 |
Axis-2 site score, 4th root transformation, |
|