Ecological Archives E093-145-A3

Jessica A. Bryant, Frank J. Stewart, John M. Eppley, and Edward F. DeLong. 2012. Microbial community phylogenetic and trait diversity declines with depth in a marine oxygen minimum zone. Ecology 93:1659–1673. http://dx.doi.org/10.1890/11-1204.1

Appendix C. Abundance and richness of KEGG Pathways.

Table C1. KO richness (FRK) within the 40 KEGG Pathways with the greatest change in FRK across depth at the ETSP.*

KEGG Pathway 35 m 50 m 70 m 110 m 200 m Change across
gradient
ko03040 Spliceosome 31.90 49.51 3.82 2.40 2.14 29.76
ko03010 Ribosome 90.81 101.90 80.00 66.21 66.09 24.73
ko04120 Ubiquitin mediated proteolysis 23.54 35.06 5.37 2.82 2.38 21.15
ko00230 Purine metabolism 127.97 137.72 122.19 110.95 107.90 20.08
ko04111 Cell cycle - yeast 21.22 34.90 4.70 3.21 1.40 19.81
ko04110 Cell cycle 21.43 37.52 4.21 2.72 1.73 19.69
ko00240 Pyrimidine metabolism 88.75 97.29 81.63 72.06 69.63 19.13
ko00195 Photosynthesis 29.99 38.00 16.16 11.83 11.51 18.48
ko04141 Protein processing in endoplasmic reticulum 22.82 36.27 10.81 5.35 5.42 17.40
ko04142 Lysosome 27.80 36.28 16.02 13.93 12.32 15.48
ko05016 Huntington's disease 37.53 43.35 23.86 21.23 22.26 15.27
ko00190 Oxidative phosphorylation 89.01 97.17 83.33 75.96 73.99 15.02
ko04113 Meiosis - yeast 17.69 28.51 4.78 3.57 2.68 15.01
ko03013 RNA transport 22.85 37.18 14.14 9.95 8.16 14.69
ko00860 Porphyrin and chlorophyll metabolism 63.77 65.93 56.86 50.64 50.06 13.71
ko04114 Oocyte meiosis 13.96 20.72 3.04 2.70 1.58 12.38
ko03018 RNA degradation 32.16 41.31 23.85 19.69 19.95 12.21
ko02010 ABC transporters 140.81 144.67 134.73 126.39 128.73 12.08
ko04145 Phagosome 14.32 23.83 6.31 3.76 2.33 11.99
ko03020 RNA polymerase 30.54 34.85 25.97 18.43 18.60 11.94
ko05010 Alzheimer's disease 31.02 36.05 21.39 20.31 20.30 10.72
ko03050 Proteasome 13.64 23.43 4.80 3.84 3.05 10.60
ko00906 Carotenoid biosynthesis 14.51 14.94 7.55 4.97 4.01 10.50
ko04144 Endocytosis 11.84 20.97 4.64 1.97 2.00 9.84
ko00196 Photosynthesis - antenna proteins 10.04 12.63 2.89 0.24 0.29 9.75
ko05200 Pathways in cancer 14.68 25.71 6.88 5.19 5.16 9.52
ko04010 MAPK signaling pathway 10.26 17.68 2.63 0.81 0.91 9.34
ko03420 Nucleotide excision repair 22.41 31.77 16.13 14.70 13.29 9.12
ko00627 Aminobenzoate degradation 37.25 35.82 31.07 30.50 28.29 8.97
ko03030 DNA replication 29.08 36.05 24.09 21.13 20.29 8.79
ko00330 Arginine and proline metabolism 79.09 79.71 75.12 71.10 70.53 8.56
ko04020 Calcium signaling pathway 10.76 17.75 3.71 2.67 2.34 8.42
ko05152 Tuberculosis 14.11 18.81 8.55 7.25 5.78 8.33
ko04914 Progesterone-mediated oocyte maturation 10.28 14.94 2.60 3.03 2.43 7.86
ko04910 Insulin signaling pathway 13.29 18.91 7.77 5.79 6.09 7.20
ko00020 Citrate cycle (TCA cycle) 35.45 36.53 42.17 41.19 43.32 -7.87
ko00633 Nitrotoluene degradation 7.88 7.28 14.39 15.60 16.13 -8.24
ko00720 Carbon fixation pathways in prokaryotes 40.21 40.19 48.39 48.42 49.08 -8.87
ko00910 Nitrogen metabolism 42.15 40.28 54.45 55.34 53.64 -11.49
ko02020 Two-component system 88.50 89.55 116.36 111.12 103.28 -14.78

*FRK at all depths was normalized to the smallest BATS library using rarefaction.
Differences in FRK between 35 m samples and 200 m samples. Positive values indicate that FRK is higher at 35 m. Negative values indicate that FRK is higher at 200 m.


Table C2. KEGG Pathway abundance within the 40 KEGG Pathways with the greatest change in abundance across depth at the ETSP.*

KEGG Pathway 35 m 50 m 70 m 110 m 200 m Change across
gradient
ko00240 Pyrimidine metabolism 2687.92 2894.09 2423.98 2374.23 2477.62 210.30
ko00280 Valine, leucine and isoleucine degradation 1273.36 1379.97 1178.22 1037.09 1084.29 189.07
ko00903 Limonene and pinene degradation 512.21 495.48 449.95 385.31 371.75 140.46
ko00627 Aminobenzoate degradation 459.42 425.21 408.45 343.67 324.12 135.30
ko00310 Lysine degradation 793.50 790.90 714.06 685.81 661.89 131.61
ko00906 Carotenoid biosynthesis 143.58 155.31 43.44 19.48 14.54 129.04
ko00625 Chloroalkane and chloroalkene degradation 548.18 510.24 497.35 423.96 420.75 127.43
ko03010 Ribosome 1234.54 1341.26 1091.24 1063.15 1115.07 119.48
ko00410 beta-Alanine metabolism 628.14 634.53 583.01 485.15 510.93 117.21
ko00380 Tryptophan metabolism 824.33 855.45 728.81 673.00 709.29 115.04
ko00071 Fatty acid metabolism 1046.12 1031.73 978.74 920.15 938.68 107.44
ko00363 Bisphenol degradation 266.39 219.50 214.70 194.62 167.37 99.02
ko00230 Purine metabolism 3392.16 3561.96 3291.01 3242.06 3299.27 92.89
ko03030 DNA replication 926.25 907.48 854.51 856.07 835.17 91.08
ko00480 Glutathione metabolism 579.13 538.86 453.74 502.42 490.05 89.08
ko02040 Flagellar assembly 168.33 181.05 177.20 124.32 85.93 82.40
ko03013 RNA transport 124.63 196.83 92.64 55.89 44.84 79.79
ko05016 Huntington's disease 258.71 275.85 157.60 139.60 179.20 79.51
ko03410 Base excision repair 582.53 601.64 492.05 489.47 505.23 77.30
ko00540 Lipopolysaccharide biosynthesis 438.91 389.64 462.67 554.98 512.30 -73.39
ko00860 Porphyrin and chlorophyll metabolism 790.50 749.84 822.49 864.43 865.00 -74.50
ko00650 Butanoate metabolism 1209.47 1253.04 1251.57 1246.35 1285.65 -76.18
ko00670 One carbon pool by folate 757.40 758.44 797.23 808.78 835.11 -77.71
ko00521 Streptomycin biosynthesis 257.61 251.48 332.16 336.03 346.04 -88.43
ko00620 Pyruvate metabolism 1724.25 1698.47 1675.30 1720.17 1813.45 -89.20
ko00920 Sulfur metabolism 343.58 347.76 390.75 420.50 453.65 -110.07
ko00450 Selenocompound metabolism 457.08 456.04 550.19 547.58 581.40 -124.32
ko00330 Arginine and proline metabolism 1580.57 1498.54 1661.16 1596.24 1714.13 -133.56
ko00270 Cysteine and methionine metabolism 1019.42 1019.78 1100.46 1105.51 1154.75 -135.32
ko00250 Alanine, aspartate and glutamate metabolism 1683.45 1673.02 1694.30 1688.97 1831.69 -148.24
ko00630 Glyoxylate and dicarboxylate metabolism 939.02 946.02 1000.49 1011.56 1088.53 -149.50
ko00190 Oxidative phosphorylation 1742.66 1780.43 1743.52 1705.19 1909.47 -166.81
ko00633 Nitrotoluene degradation 53.87 72.40 184.12 225.95 252.31 -198.44
ko00720 Carbon fixation pathways in prokaryotes 1599.92 1588.00 1616.06 1655.48 1808.43 -208.51
ko00260 Glycine, serine and threonine metabolism 1823.90 1756.18 1875.56 1871.04 2034.74 -210.84
ko00520 Amino sugar and nucleotide sugar metabolism 1145.12 1152.04 1282.22 1348.85 1392.21 -247.10
ko02010 ABC transporters 2117.22 1989.55 2343.51 2302.48 2377.41 -260.20
ko00680 Methane metabolism 1115.82 1161.45 1379.70 1382.29 1485.44 -369.62
ko02020 Two-component system 1006.75 912.50 1356.20 1437.64 1411.80 -405.05
ko00910 Nitrogen metabolism 1075.54 1023.42 1461.58 1652.20 1713.25 -637.71

*KEGG Pathway abundance at all depths was normalized to the smallest BATS library using rarefaction.
Differences in abundance between the 35 m samples and the 200 m samples.


Table C3. KO richness (FRK) within the 40 KEGG Pathways with the greatest change in FRK across depth at BATS.*

KEGG Pathway 20 m 50 m 100 m 500 m Change across
gradient
ko00195 Photosynthesis 37.08 47.87 46.54 21.00 16.08
ko00196 Photosynthesis - antenna proteins 9.70 4.49 7.99 0.00 9.70
ko04114 Oocyte meiosis 8.35 7.96 5.97 3.00 5.35
ko00860 Porphyrin and chlorophyll metabolism 60.94 62.79 60.66 56.00 4.94
ko04142 Lysosome 21.71 23.05 20.24 17.00 4.71
ko05012 Parkinson's disease 21.57 21.26 19.76 17.00 4.57
ko05016 Huntington's disease 27.54 29.01 27.05 23.00 4.54
ko05010 Alzheimer's disease 24.24 24.94 23.45 20.00 4.24
ko00906 Carotenoid biosynthesis 13.09 12.95 11.76 9.00 4.09
ko00410 beta-Alanine metabolism 17.84 18.27 19.48 22.00 -4.17
ko00430 Taurine and hypotaurine metabolism 6.66 5.79 7.47 11.00 -4.34
ko03410 Base excision repair 18.64 19.65 19.10 23.00 -4.36
ko00770 Pantothenate and CoA biosynthesis 17.61 20.18 19.33 22.00 -4.39
ko03050 Proteasome 1.59 6.79 5.54 6.00 -4.41
ko03030 DNA replication 21.53 22.28 20.27 26.00 -4.47
ko00380 Tryptophan metabolism 22.33 23.94 23.68 27.00 -4.67
ko00624 Polycyclic aromatic hydrocarbon degradation 11.29 12.29 10.38 16.00 -4.71
ko02010 ABC transporters 135.06 139.20 128.01 140.00 -4.94
ko00360 Phenylalanine metabolism 23.67 26.77 27.98 29.00 -5.33
ko00350 Tyrosine metabolism 26.50 30.18 28.62 32.00 -5.50
ko00190 Oxidative phosphorylation 80.43 83.60 80.29 86.00 -5.57
ko00520 Amino sugar and nucleotide sugar metabolism 51.93 52.16 52.52 58.00 -6.07
ko00020 Citrate cycle (TCA cycle) 32.89 32.79 32.36 39.00 -6.11
ko00300 Lysine biosynthesis 21.78 22.10 22.71 28.00 -6.22
ko00720 Carbon fixation pathways in prokaryotes 37.55 38.08 37.22 44.00 -6.45
ko00740 Riboflavin metabolism 8.31 10.04 10.07 15.00 -6.69
ko00623 Toluene degradation 11.25 13.63 12.39 18.00 -6.75
ko00010 Glycolysis / Gluconeogenesis 34.92 36.45 35.96 42.00 -7.08
ko00910 Nitrogen metabolism 28.43 31.72 32.01 36.00 -7.57
ko03020 RNA polymerase 14.88 20.17 20.81 24.00 -9.13
ko00640 Propanoate metabolism 35.09 35.95 37.07 45.00 -9.91
ko00650 Butanoate metabolism 41.64 42.52 40.05 52.00 -10.37
ko00627 Aminobenzoate degradation 26.32 29.97 28.09 38.00 -11.68
ko00620 Pyruvate metabolism 40.60 42.85 44.09 53.00 -12.40
ko00240 Pyrimidine metabolism 64.88 72.72 73.65 80.00 -15.12
ko00362 Benzoate degradation 29.42 30.79 28.38 45.00 -15.58
ko00680 Methane metabolism 48.48 53.68 54.88 67.00 -18.52
ko00230 Purine metabolism 98.45 105.32 109.77 118.00 -19.55
ko03010 Ribosome 57.96 66.60 65.74 80.00 -22.04
ko02020 Two-component system 71.66 77.21 71.75 100.00 -28.34

*FRK at all depths was normalized to the smallest BATS library using rarefaction.
Differences in FRK between 20 m samples and 500 m samples. Positive values indicate that FRK is higher at 20 m. Negative values indicate that FRK is higher at 500 m.


Table C4. KEGG Pathway abundance within the 40 KEGG Pathways with the greatest change in abundance across depth at BATS.*

KEGG Pathways 20 m 50 m 100 m 500 m Change across
gradient
ko00550 Peptidoglycan biosynthesis 939.38 895.88 937.32 568.00 371.38
ko00240 Pyrimidine metabolism 2772.77 2776.54 2756.94 2411.00 361.77
ko00230 Purine metabolism 3441.09 3451.46 3487.66 3169.00 272.09
ko00190 Oxidative phosphorylation 2020.93 1836.08 1923.64 1788.00 232.93
ko03440 Homologous recombination 1113.14 1189.68 1139.19 900.00 213.14
ko00400 Phenylalanine, tyrosine and tryptophan biosynthesis 1000.29 943.27 930.32 798.00 202.29
ko04112 Cell cycle - Caulobacter 733.79 679.13 679.14 535.00 198.79
ko03018 RNA degradation 906.55 927.62 931.09 711.00 195.55
ko03070 Bacterial secretion system 775.78 709.88 728.21 583.00 192.78
ko00860 Porphyrin and chlorophyll metabolism 900.73 1296.06 1194.71 714.00 186.73
ko03010 Ribosome 1301.57 1276.68 1283.89 1116.00 185.57
ko03030 DNA replication 962.16 973.42 961.98 781.00 181.16
ko03060 Protein export 735.36 688.51 717.43 558.00 177.36
ko00970 Aminoacyl-tRNA biosynthesis 2275.81 2169.90 2255.89 2111.00 164.81
ko00195 Photosynthesis 482.63 738.80 660.52 322.00 160.63
ko00300 Lysine biosynthesis 789.26 695.60 733.11 637.00 152.26
ko00710 Carbon fixation in photosynthetic organisms 972.57 956.38 958.75 823.00 149.57
ko03020 RNA polymerase 817.74 801.87 799.51 670.00 147.74
ko00620 Pyruvate metabolism 1902.20 1644.40 1768.82 1762.00 140.20
ko00626 Naphthalene degradation 319.87 289.41 293.99 462.00 -142.14
ko00903 Limonene and pinene degradation 419.77 390.59 396.31 567.00 -147.23
ko00410 beta-Alanine metabolism 573.29 523.63 522.85 728.00 -154.71
ko00460 Cyanoamino acid metabolism 257.40 288.41 250.29 418.00 -160.60
ko01040 Biosynthesis of unsaturated fatty acids 179.37 193.25 185.55 354.00 -174.64
ko00380 Tryptophan metabolism 814.00 719.78 751.79 994.00 -180.00
ko00633 Nitrotoluene degradation 32.70 39.08 47.06 227.00 -194.30
ko00930 Caprolactam degradation 169.76 192.60 167.96 365.00 -195.25
ko00281 Geraniol degradation 274.93 290.05 271.57 507.00 -232.08
ko00630 Glyoxylate and dicarboxylate metabolism 904.85 791.85 837.76 1157.00 -252.15
ko00260 Glycine, serine and threonine metabolism 1821.46 1577.51 1807.29 2074.00 -252.55
ko00640 Propanoate metabolism 1400.50 1231.62 1299.51 1673.00 -272.50
ko00720 Carbon fixation pathways in prokaryotes 1612.79 1477.67 1561.29 1892.00 -279.21
ko00350 Tyrosine metabolism 491.76 429.77 486.60 771.00 -279.25
ko00627 Aminobenzoate degradation 355.32 386.74 340.01 670.00 -314.68
ko00330 Arginine and proline metabolism 1516.55 1501.64 1548.85 1844.00 -327.45
ko00362 Benzoate degradation 340.25 354.59 346.07 706.00 -365.75
ko00071 Fatty acid metabolism 891.66 850.00 849.09 1273.00 -381.34
ko00680 Methane metabolism 1093.28 1086.76 1108.63 1546.00 -452.72
ko00650 Butanoate metabolism 1152.42 1023.78 1106.13 1619.00 -466.58
ko00280 Valine, leucine and isoleucine degradation 1048.32 997.57 1048.63 1578.00 -529.68

*KEGG Pathway abundance at all depths was normalized to the smallest BATS library using rarefaction.
Differences in abundance between 20 m samples and 500 m samples. Positive values indicate that the pathway is more abundant at 20 m. Negative values indicate that the pathway is more abundant at 500 m.


Table C5. KO richness (FRK) within the 40 KEGG Pathways with the greatest change in FRK across depth at HOT.*

KEGG Pathway 25 m 75 m 110 m 500 m Change across
gradient
ko00195 Photosynthesis 49.19 48.32 46.81 25.16 24.03
ko05016 Huntington's disease 29.41 24.24 32.08 24.25 5.16
ko05010 Alzheimer's disease 24.58 22.07 27.48 20.31 4.27
ko00906 Carotenoid biosynthesis 13.52 12.70 12.79 9.38 4.14
ko04910 Insulin signaling pathway 10.29 7.70 16.13 6.43 3.86
ko05012 Parkinson's disease 21.07 17.39 23.09 17.30 3.77
ko00860 Porphyrin and chlorophyll metabolism 63.51 60.24 62.13 59.78 3.74
ko00051 Fructose and mannose metabolism 34.39 32.13 36.18 30.81 3.58
ko04142 Lysosome 19.99 16.91 27.61 16.55 3.44
ko03040 Spliceosome 7.94 7.14 17.34 4.53 3.40
ko04120 Ubiquitin mediated proteolysis 7.52 6.20 13.88 4.13 3.38
ko02060 Phosphotransferase system (PTS) 8.53 6.59 9.13 5.15 3.38
ko03070 Bacterial secretion system 27.80 26.05 24.08 24.48 3.32
ko04020 Calcium signaling pathway 6.04 2.84 8.98 2.73 3.31
ko04010 MAPK signaling pathway 5.58 3.79 11.61 2.32 3.27
ko02030 Bacterial chemotaxis 16.62 15.53 12.77 13.68 2.94
ko04974 Protein digestion and absorption 2.10 4.14 4.55 5.01 -2.91
ko00770 Pantothenate and CoA biosynthesis 18.42 19.23 19.88 21.53 -3.10
ko00364 Fluorobenzoate degradation 5.65 6.73 6.95 8.88 -3.23
ko00010 Glycolysis / Gluconeogenesis 36.09 35.55 37.23 39.95 -3.86
ko00250 Alanine, aspartate and glutamate metabolism 34.39 34.87 39.25 38.55 -4.16
ko00627 Aminobenzoate degradation 28.51 27.73 31.90 32.87 -4.36
ko00640 Propanoate metabolism 37.90 37.36 38.78 42.66 -4.76
ko03030 DNA replication 21.61 20.71 25.48 26.43 -4.82
ko00360 Phenylalanine metabolism 24.83 24.70 26.75 29.73 -4.89
ko00630 Glyoxylate and dicarboxylate metabolism 36.16 36.51 38.79 41.73 -5.56
ko00623 Toluene degradation 11.76 12.59 14.08 17.98 -6.22
ko00910 Nitrogen metabolism 32.16 32.33 37.90 38.89 -6.73
ko00300 Lysine biosynthesis 21.53 22.35 22.14 28.50 -6.97
ko00720 Carbon fixation pathways in prokaryotes 37.38 37.23 39.57 44.61 -7.23
ko00362 Benzoate degradation 30.43 29.40 31.56 37.82 -7.39
ko03020 RNA polymerase 19.21 18.99 22.41 26.67 -7.46
ko00620 Pyruvate metabolism 42.31 42.31 43.54 49.98 -7.67
ko00020 Citrate cycle (TCA cycle) 31.56 31.40 35.04 39.45 -7.90
ko00650 Butanoate metabolism 41.75 41.29 42.99 49.69 -7.95
ko02020 Two-component system 89.31 84.75 86.55 98.08 -8.77
ko00680 Methane metabolism 53.91 53.09 55.99 65.57 -11.66
ko00240 Pyrimidine metabolism 69.75 70.17 78.68 81.81 -12.07
ko00230 Purine metabolism 107.42 105.50 117.23 122.49 -15.07
ko03010 Ribosome 69.44 66.03 73.46 86.94 -17.49

*FRK at all depths was normalized to the smallest BATS library using rarefaction.
Differences in FRK between 25 m samples and 500 m samples. Positive values indicate that FRK is higher at 25 m. Negative values indicate that FRK is higher at 500 m.


Table C6. KEGG pathway abundance within the 40 pathways with the greatest change in abundance across depth at HOT.*

KEGG Pathway 25 m 75 m 110 m 500 m Change across
gradient
ko00860 Porphyrin and chlorophyll metabolism 1456.59 1593.64 1168.79 896.42 560.17
ko00195 Photosynthesis 822.88 966.37 763.86 298.05 524.83
ko03440 Homologous recombination 1180.81 1187.05 1130.21 856.29 324.53
ko00500 Starch and sucrose metabolism 677.05 730.65 595.53 364.60 312.45
ko00550 Peptidoglycan biosynthesis 884.44 858.98 825.09 617.01 267.43
ko03420 Nucleotide excision repair 984.73 972.67 928.33 749.72 235.02
ko00480 Glutathione metabolism 694.67 646.89 568.72 463.28 231.38
ko00240 Pyrimidine metabolism 2766.25 2917.89 2854.73 2535.28 230.97
ko00906 Carotenoid biosynthesis 234.11 262.49 197.55 36.55 197.57
ko03430 Mismatch repair 966.93 948.41 915.60 779.00 187.93
ko03018 RNA degradation 917.38 1013.27 858.81 730.65 186.73
ko00230 Purine metabolism 3530.22 3636.83 3467.21 3352.78 177.45
ko03030 DNA replication 943.45 932.13 940.16 787.67 155.78
ko04112 Cell cycle - Caulobacter 684.02 694.57 654.27 533.26 150.76
ko00281 Geraniol degradation 246.71 226.46 297.11 386.00 -139.29
ko00410 beta-Alanine metabolism 508.02 457.15 491.50 651.50 -143.48
ko00910 Nitrogen metabolism 880.58 887.16 950.88 1044.65 -164.06
ko00903 Limonene and pinene degradation 370.15 329.42 378.88 535.12 -164.97
ko00360 Phenylalanine metabolism 340.65 322.43 399.53 505.89 -165.23
ko00624 Polycyclic aromatic hydrocarbon degradation 134.56 109.06 166.88 302.78 -168.22
ko00250 Alanine, aspartate and glutamate metabolism 1549.65 1538.49 1596.40 1723.98 -174.32
ko00770 Pantothenate and CoA biosynthesis 629.73 643.33 666.94 805.47 -175.74
ko00380 Tryptophan metabolism 695.57 628.44 741.97 872.27 -176.70
ko00340 Histidine metabolism 628.47 635.88 655.47 814.52 -186.05
ko00626 Naphthalene degradation 241.53 226.58 298.83 436.56 -195.03
ko00625 Chloroalkane and chloroalkene degradation 389.92 374.21 447.44 599.05 -209.14
ko00020 Citrate cycle (TCA cycle) 1273.27 1224.03 1385.74 1502.74 -229.47
ko00627 Aminobenzoate degradation 317.19 278.48 350.45 555.43 -238.23
ko00362 Benzoate degradation 321.38 290.28 382.76 559.91 -238.53
ko00071 Fatty acid metabolism 770.74 727.45 866.71 1084.35 -313.61
ko00330 Arginine and proline metabolism 1467.90 1474.66 1464.29 1784.09 -316.20
ko00630 Glyoxylate and dicarboxylate metabolism 772.21 741.94 840.44 1105.24 -333.04
ko00640 Propanoate metabolism 1176.46 1102.38 1236.87 1521.36 -344.91
ko00350 Tyrosine metabolism 374.74 363.48 494.82 732.08 -357.34
ko00720 Carbon fixation pathways in prokaryotes 1378.10 1381.86 1522.69 1774.78 -396.68
ko02010 ABC transporters 1980.04 1956.80 2098.67 2386.20 -406.16
ko00260 Glycine, serine and threonine metabolism 1562.37 1620.96 1626.18 1970.89 -408.52
ko00280 Valine, leucine and isoleucine degradation 964.40 898.89 1055.70 1373.08 -408.68
ko00650 Butanoate metabolism 986.02 919.47 1128.40 1424.71 -438.69
ko00680 Methane metabolism 1051.89 1095.26 1103.63 1492.51 -440.62

*KEGG Pathway abundance at all depths was normalized to the smallest BATS library using rarefaction.
Differences in abundance between 25 m samples and 500 m samples. Positive values indicate that the pathway is more abundant at 25 m. Negative values indicate that the pathway is more abundant at 500 m.


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