Ecological Archives E093-145-A1

Jessica A. Bryant, Frank J. Stewart, John M. Eppley, and Edward F. DeLong. 2012. Microbial community phylogenetic and trait diversity declines with depth in a marine oxygen minimum zone. Ecology 93:1659–1673. http://dx.doi.org/10.1890/11-1204.1

Appendix A (Table A1). Bermuda Atlantic Time-Series (BATS) and Hawaii Ocean Time-Series (HOT) sample and sequence library characteristics.

Depth
Series
Depth of
sample
(m)
No.
sequenced
reads*
No.
SSU
reads
SSU %
identity to
ARB-Silva
Volume
of water
filtered (L)
% KEGG
hits to
total reads
NCBI
accession
number
BATS216 20 344731 593 97.59 264 50.03 SRX008032
50 424779 602 97.66 264 42.85 SRX008033
100 499615 554 97.34 264 45.63 SRX008035
500 166760 207 97.50 264 32.85 SRX007384
HOT186 25 598938 834 97.63 264 40.57 SRX007372
75 656018 818 98.00 264 39.66 SRX007369
110 460958 749 97.13 264 36.44 SRX007370
500 976346 1301 97.59 264 39.34 SRX007371

*Duplicate reads not included
Average % sequence identity of each SSU read to its closest hit in the ARB-SILVA database
Previously published in Coleman et al. 2010


Literature Cited

Coleman, M. L., and S. W. Chisholm. 2010. Ecosystem-specific selection pressures revealed through comparative population genomics. Proceedings of the National Academy of Sciences 107:18634–18639.


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